EBRAINS Brain Simulation School 2022
Training on Single Neuron Models, Brain Circuit Models, Cognition, Collaboratory, Synaptic Plasticity and Learning
30 May – 3 June 2022 | Palermo, Italy
About
Registration for on-site participation
- Admission to all the sessions of the Scientific Programme
- Conference material
- Lunch during the event
- Coffee breaks during the event
- Social Dinner
The fee does not include travel, accommodation and any other service not stated above.
Interested registrants will be put on a waiting-list and will be notified of any available tickets in case of cancellation.
The hotels, which are closest to the venue, are Fletcher Parkhotel Van Monte and Fletcher Hotel-Restaurant Erica. They are also part of the same hotel chain as the venue. You can book a room via the hotel websites.
The BrainSim school will start on Monday 30 May 2022 at 9:00 AM CET and will end in the afternoon of Friday 3 June 2022. The programme comprises keynote lectures, interactive sessions, student presentations, tutorials and hands-on sessions, as well as a social dinner.
Registration fee waivers are not available for the EBRAINS Brain Simulation School 2022.
The EBRAINS Brain Simulation School 2022 aims at introducing the participants to the latest achievements and innovations of the digital infrastructure for brain research EBRAINS, created by the Human Brain Project. The School will offer tutorials on EBRAINS Tools and eServices. The students will be presented with an overview of the EBRAINS research platform, discussed by the leaders of the Human Brain Project, and gain practical skills in using EBRAINS resources to implement cellular and network level computational models, to use EBRAINS Computing Services to configure and run simulations, and to visualise/analyse the results. Through tutorials, interactive sessions and hands-on activities, attendees will learn how to interact with EBRAINS to carry out their own research, to set up and manage a data-driven collaborative project, or to use the EBRAINS platform to interact with internal and external databases.
The target audience of this school are advanced master students, doctoral students and postdoctoral researchers in biomedical and technology sciences, from medicine, biology, psychology, to mathematics, informatics, information technology, physics, chemistry, who would like to get an introduction to the neuroinformatics and computational neuroscience tools available in the EBRAINS Infrastructure. The event is limited to 50 participants. Additional registrations will be placed on a waiting list.
Prior knowledge needed:
To have the most successful experience at the EBRAINS School on Brain Simulation the organizers recommend that attendees have:
- Expertise in python coding and
- Knowledge of Neuron (beneficial)
Registration
Registration is closed.
Covid-19 information
Before registering to the event, participants should be aware of the COVID-19 prevention measures in place in Italy to enter the country and participate at the EBRAINS Brain Simulation School 2022.
For more information visit the Italian Public Health Website.
The organisers encourage participants to keep themselves informed about the regulations in place at the time of the event and plan accordingly.
Registration information
General Admission Ticket* | €150.00 |
* Registration for on-site participation only
What is covered by the registration fee?
Registration for on-site participation
- Admission to all the sessions of the Scientific Programme
- Conference material
- Lunch during the event
- Coffee breaks during the event
- Social Dinner
The fee does not include travel, accommodation or any other services not stated above.
Payment modalities
Payment of registration fees can be made in EURO in the form of
- Credit or debit card
- PayPal
- Sofort
- Sepa Direct Debit
Confirmation of registration
After the registration has been completed you will receive an automatically generated notification via email, including a confirmation of payment and an online ticket for the event. If you need an invoice, please contact training-support@humanbrainproject.eu
Cancellations and refunds
Notice of cancellation has to be made in writing via email to the HBP Education Programme Office to: training-support@humanbrainproject.eu. The policy for refunding registration fees is as follows:
Written cancellation received:
before 30 April 2022: 100% refund
after 1 May: no refund*.
*if you are unable to attend the School due to a Covid-19 infection, a refund of the registration fee can be issued until 20 May 2022. To receive the refund proof of a positive COVID-19 test (a rapid antigen test swab -valid for 48 hours -or molecular PCR test swab -valid for 72 hours) will have to be submitted to the organizers via email before 20 May 2022. Refund request due to COVID-19 infection after 20 May 2022 cannot be taken into account.
No refunds will be granted for unattended events or early termination of attendance, in case of cancellation of speakers, lack of space in the conference room, or any other incidents during the BrainSim School that are beyond the control of the conference organisers.
Letter of invitation
Letters of invitation cannot be issued for this event.
Modification of the programme
The BrainSim School organisers reserve the right to modify the programme. No refunds can be granted in case of cancellation of speakers, lack of space in the conference room, or any other incidents during the School that are beyond the control of the conference organisers.
Cancellation of the BrainSim School
In the event that the School cannot be held or is postponed due to events beyond the control of the conference organisers (force majeure) or due to events that are not attributable to wrongful intent or gross negligence of the conference organisers, the conference organisers cannot be held liable by delegates for any damages, costs, or losses incurred, such as transportation costs, accommodation costs, costs for additional orders, financial losses, etc.
Logistics
Accommodation
The School will be hosted at the Splendid Hotel La Torre. We have blocked for a limited time the best rooms at a reduced cost of 100EUR/night including breakfast for single occupancy (double occupancy 130€, 160€ for gulf view rooms), which will be assigned on a first-come-first-serve basis. If you are interested in reserving one of these rooms, please contact francesca.spataro@ibf.cnr.it specifying travel dates and type of room. To guarantee the reservation with your credit card and/or to pay for your stay you will be instructed to contact the hotel directly.
There are a few hotels and many B&Bs available in Mondello (PA), and participants can book through their preferred reservation system. Please note that no special discounts are available for these options.
Before finalising the booking, participants are highly encouraged to ask for the current Covid-19 prevention measures to enter the accommodation facility and inquire about the booking cancellation policy.
Travel information
Italian COVID-19 Entry Regulation: For all types of entry into the country, evidence of a vaccination, a current test, or recovery from Covid-19 is required. Please check before entry if your country is subject to further restrictions via the Italian Infocovid website.
How to get to Palermo
The best way to reach the BrainSim Summer school in Mondello is by plane arriving at the Palermo International Airport “Falcone-Borsellino”. Detailed information can be found on the airport website.
It is also possible to reach Palermo from the mainland via train, car, coach and ferries. More information can be found here.
How to get to Mondello (BrainSim School)
Mondello is located 12km from the City of Palermo and can be reached via bus, car and taxi. From the Palermo International Airport “Falcone-Borsellino” Mondello (25KM from the airport) can be reached by taxi (for about 50€ per ride) or by booking a private transportation (40-50€ per ride). Please contact francesca.spataro@ibf.cnr.it if you are interested in this latter option.
Venue Address:
Splendid Hotel la Torre
11 Via Piano di Gallo
90151 Palermo
Italy
Preliminary Scientific Programme
This programme will be updated regularly and is subject to change. Times displayed are in CEST/GMT+2/UTC+2.
09:00 – 9:30 | Welcome & Introduction to the School Michele Migliore | Institute of Biophysics, Italian National Research Council |
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09:30 – 10:30 |
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10:30 – 11:00 | Coffee break |
11:00 – 11:45 | The EBRAINS Research Platform Jan Bjaalie | Human Brain Project Research Infrastructure Director, Institute of Basic Medical Sciences, University of Oslo |
11:45 – 12:30 |
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12:30 – 14:30 |
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14:30 – 15:15 | EBRAINS technology for developers Marc Morgan | EBRAINS AISBL |
15:15 – 16:00 | Workshop: The EBRAINS Collaboratory for users Annapaola Santarsiero | EBRAINS AISBL |
Tutorial I: Hands-on EBRAINS for electrophysiological feature extraction |
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16:00 – 17:30 |
*Coffee available from 16:00 – 16:30 |
17:30 – 18:00 | Interactive session |
Chair: Paola Vitale | Institute of Biophysics, Italian National Research Council |
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09:00 – 10:30 | Student presentations I |
10:30 – 11:00 |
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11:00 – 12:30 | Student presentations II |
12:30 – 14:30 | Lunch break |
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14:30 – 15:15 |
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15:15 – 16:00 | Detailed models of synaptic plasticity Aušra Saudargienė | Lithuanian University of Health Sciences |
Tutorial II: Hands-on EBRAINS for modelling local field potentials |
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16:00 – 17:30 |
*Coffee available from 16:00 – 16:30 |
17:30 – 18:00 | Interactive session |
20:00 | Social Dinner |
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09:00 – 10:30 |
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10:30 – 11:00 | Coffee break |
11:00 – 12:30 | Single cell model optimisation: algorithms, methods, resources Luca L. Bologna, Rosanna Migliore & Paola Vitale | Institute of Biophysics, Italian National Research Council |
12:30 – 14:30 |
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Tutorial III: Hands-on EBRAINS for single neuron modelling |
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14:30 – 17:30 |
*Coffee available from 16:00 – 16:30 |
17:30 – 18:00 | Interactive session |
Session V: Brain Circuit Models Chair: Michele Migliore | Institute of Biophysics, Italian National Research Council |
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09:00 – 09:30 |
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09:30 – 10:00 |
Assistant: Davide Bella | EPFL |
10:00 – 10:30 | Hippocampus Hub and MOOC Jean-Denis Courcol | Blue Brain Project, EPFL |
10:30 – 11:00 |
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11:00 – 12:30 | Hands-on Exercises on analysing the circuit and simulations and Hippocampus Hub Armando Romani, Gianluca Ficarelli & Joni Herttuainen | Blue Brain Project, EPFL |
12:30 – 14:30 | Lunch break |
Success story: Detailed model of cerebellum Chair: Daniela Gandolfi | UNIMORE |
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14:30 – 15:15 | Multiscale brain modeling Egidio D'Angelo | University of Pavia |
15:15 – 16:00 | Modeling pipeline for the Cerebellum Claudia Casellato | University of Pavia |
16:00 – 16:15 | Coffee break (Coffee available from 16:00 – 16:30) |
Tutorial IV: Hands-on, circuit modelling |
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16:15 – 17:15 |
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17:15 – 18:00 | The Brain Scaffold Builder Claudia Casellato & Robin De Schepper | University of Pavia |
Session VI: Cognition
Chair: Egidio D‘Angelo | University of Pavia
09:00 – 10:30
Scientific drive: Modelling cognitive functions
Michele Migliore | Institute of Biophysics, Italian National Research Council
10:30 – 11:00
Coffee break
11:00 – 12:00
Using NEURON+python, from laptops to supercomputer systems
Michael Hines | Yale University
12:00 – 12:30
Tech drive: NetPyNE, a tool for multiscale modeling of brain circuits
Salvador Dura-Bernal | SUNY
12:30 – 14:30
Lunch break
Tutorial V: Hands-on EBRAINS for building networks
14:30 – 15:00
Tech drive: interacting with HPC systems
Luca L. Bologna | Institute of Biophysics, Italian National Research Council
15:00 – 16:00
Hands-on session: using NetPyNE on EBRAINS to build networks
Salvador Dura-Bernal | SUNY
Adam Ponzi | Institute of Biophysics, Italian National Research Council
16:00 – 17:30
Interactive session and conclusions*
*Coffee available from 16:00 – 16:30
Confirmed Speakers
Davide Bella | EPFL, Switzerland
Jan Bjaalie | University of Oslo, Norway
Luca L. Bologna | Institute of Biophysics, Italian National Research Council, Italy
Claudia Casellato | University of Pavia, Italy
Egidio D'Angelo | University of Pavia, Italy
Jean-Denis Courcol | Blue Brain Project, EPFL, Switzerland
Salvador Dura-Bernal | SUNY, USA
Gaute Einevoll | Norwegian University of Life Sciences, Norway
Gianluca Ficarelli | Blue Brain Project, EPFL, Switzerland
Daniela Gandolfi | UNIMORE, Italy
Joni Herttuainen | Blue Brain Project, EPFL, Switzerland
Michael Hines | Yale University, USA
Michele Migliore | Institute of Biophysics, Italian National Research Council, Italy
Rosanna Migliore | Institute of Biophysics, Italian National Research Council, Italy
Marc Morgan | EBRAINS, Brussels
France Nivelle | EBRAINS, Brussels
Adam Ponzi | Institute of Biophysics, Italian National Research Council, Italy
Anna Paola Santarsiero | EBRAINS, Brussels
Armando Romani | Blue Brain Project, EPFL, Switzerland
Aušra Saudargienė | Lithuanian University of Health Sciences, Lithuania
Felix Schürmann | Blue Brain Project, EPFL, Switzerland
Paweł Świeboda | EBRAINS, Brussels
Paola Vitale | Institute of Biophysics, Italian National Research Council, Italy
Scientific Chair & Organisers
Michele Migliore | Italian National Research Council
Aušra Saudargienė | Lithuanian University of Health Sciences
Francesca Spataro | Italian National Research Council
Alessia Bonafede | Italian National Research Council
Supported by
Venue
Splendid Hotel la Torre
Via Piano di Gallo 11
90151 Palermo
Italy